MYTE4

Prompt

6.3.2.4

Ligases. Forming carbon-nitrogen bonds. Acid--amino-acid ligases.(peptide synthases). D-alanine--D-alanine ligase.

AI Generated Sequence

302 AAs
MKKIAVLYGGYSAEREVSLKSGQACLDALREKGYDVTRIDVGRDLAEVLKELKPDVAFNALHGRFGEDGTVQGLLELMQIPYTGSGVLASALAMDKERSKQVFRAAGLPVAESVLVNRHEFAAHSPVVLKPVNEGSSFGVSIVHEQANLPPALALAWEYGPEVLVEAFIPGRELTVGVLGDEALPVTEIVPKHGFYDYEAKYAPGGSRHIVPAEIPEEITAKVQEYALRAHAALGCRGWSRTDFRWDDAAGNLVLLEVNTQPGMTPTSLVPEQAAHAGMSFGELCVWLVEDASCERNAREVR

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT96.1
NLMSIM90.0
AACOMP92.9
Seqdif (SeqID)35.0 (HYK79273.1)
Structdif (F-Target)7.1 (1iow A)

ProtNLM

NameScore
D-alanylalanine synthetase0.292
D-alanine--D-alanine ligase0.252
D-Ala-D-Ala ligase0.232
6.3.2.40.218
D-alanine--D-alanine ligase B0.001
D-Ala-D-Ala ligase B0.001
Designed by MP, using an AMD MI250 GPU