MKVZX

Prompt

6.3.2.10

Ligases. Forming carbon-nitrogen bonds. Acid--amino-acid ligases.(peptide synthases). UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase.

AI Generated Sequence

503 AAs
MIPLTLAEIAAATGGRLIGDPAPDVTGVSIDSRTIEPGGLFVALKGERFDGHDFLAQAVAKGAVGALVEREVGPLPLIVEDTRLALGRLAAAVRDRIDAPVIAITGSVGKTTVKEMIAAILSQRGETHATVGSFNNDIGVPLTLLRLPEDHRYAVIEMGANHPGEIAHLTELTRPTVAVLLNVGAAHLGEFGSLEGVAKAKGEIFEGLPADGTAILNADDPFARLWRSLAPKARVVTFGLDNADVRATSIRLDDLGRSTFTLHTPQGSRDVQLGLPGRHHVANALAAAAAAHALGADLDAIAAGLAAAEPVKGRMEVLERRGGVTLIDDSYNANPVSVMAAIDVLASMPGGRRIAVLGDMGELGEDAAELHRDVGRYARAKGLDRLLTVGPLSRHIAEGAGELGERHFADTAALIAAVRERLRPGDTVLVKGSRSSGMERVVAALVESSEEGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT91.6
NLMSIM70.0
AACOMP85.3
Seqdif (SeqID)42.3 (MDH4133783.1)
Structdif (F-Target)5.2 (4qf5 B)

ProtNLM

NameScore
D-alanyl-D-alanine-adding enzyme0.402
6.3.2.100.315
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase0.279
Multifunctional fusion protein0.000
Meso-diaminopimelate-adding enzyme0.000
Mur ligase0.000
Designed by MP, using an AMD MI250 GPU