MJQCP

Prompt

6.3.2.4

Ligases. Forming carbon-nitrogen bonds. Acid--amino-acid ligases.(peptide synthases). D-alanine--D-alanine ligase.

AI Generated Sequence

296 AAs
MKIAVLMGGYSAEREVSLKSGQACAAALRGLGYDVVEIDVGRDLGARLAEIAPDVAFNALHGRFGEDGCVQGLLETLQIPYTHSGVLASALAMDKLRSKQVFAAHGVPVAESVVLTRAEVAAHPLAPPYVVKPVNEGSSFGVHIVREAGNLPPALAEAWRYGDEVMVEAYIAGRELTVAVLGDRALGVTEIVPTAGFYDYEAKYAPGGSRHVVPAEIPAEIAAACQAYALRAHRALGCRGVSRTDFLLDAAGLVVLNETNTQPGMTATSLVPEQAAHVGIGFPELCAWMVEDASLR

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT96.7
NLMSIM90.0
AACOMP90.0
Seqdif (SeqID)29.5 (WP_284326479.1)
Structdif (F-Target)5.2 (1iow A)

ProtNLM

NameScore
D-alanylalanine synthetase0.296
D-alanine--D-alanine ligase0.255
D-Ala-D-Ala ligase0.232
6.3.2.40.211
D-alanine--D-alanine ligase B0.001
D-alanine--D-alanine ligase A0.001
Designed by MP, using an AMD MI250 GPU