M6S1G

Prompt

6.3.2.35

Ligases. Forming carbon-nitrogen bonds. Acid--amino-acid ligases.(peptide synthases). D-alanine--D-serine ligase.

AI Generated Sequence

308 AAs
MSKKHVAVLMGGWSSEREVSLSSGQACADALEAEGYEVTRIDVGRDVAAVLAELKPDVAFNALHGPFGEDGTIQGVLELLGIPYTHSGVLASALAMDKERAKQVAAAAGVPVAEARVMNRFEIAAKHPMPPPYVIKPVREGSSFGVVIVKEGQSHPPQIVLSDEWRYGDEVMVERFIPGRELTCGVMGDVALGVTEIVPVGHSFYDYDSKYAEGGSKHVIPAQIPPNIYQKIQTLALRAHQAVGCRGVSRSDFRYDDRFSDEEGLIVLEVNTQPGMTPTSLVPEMAAHAGISFGELVRWMVEDASCLR

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT93.2
NLMSIM60.0
AACOMP92.6
Seqdif (SeqID)16.9 (WP_283058824.1)
Structdif (F-Target)8.1 (4c5b A)

ProtNLM

NameScore
D-alanylalanine synthetase0.293
D-alanine--D-alanine ligase0.250
D-Ala-D-Ala ligase0.227
6.3.2.40.224
D-alanine--D-alanine ligase B0.000
D-alanine--D-alanine ligase A0.000
Designed by MP, using an AMD MI250 GPU