M6KW7

Prompt

6.3.2.4

Ligases. Forming carbon-nitrogen bonds. Acid--amino-acid ligases.(peptide synthases). D-alanine--D-alanine ligase.

AI Generated Sequence

305 AAs
MSKVAVLMGGWSAEREVSLRSGQACADALREAGYEVTRIDVGRDLAAVLAELKPDVAFNALHGRWGEDGTVQGVLELMGIPYTHSGVLASALAMDKERAKQVMAAAGLPVAEGVVMDRFAVMARHPLPPPYVIKPVREGSSVGVYIVREGQSHPPQIVESGWEHGDRVLVEPFIAGRELTVAVMGDVALGVTEIVPVDGWYDYDAKYADGGSRHVIPAEIPAEIYEKCQDYALRAHRALGCRGVSRTDFRWDDRTGEGHGELVLLEVNTQPGMTPTSLVPEQAAHAGMSFGELCRWMVEDASCDR

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT92.1
NLMSIM90.0
AACOMP91.0
Seqdif (SeqID)31.2 (WP_116399973.1)
Structdif (F-Target)7.3 (4c5b A)

ProtNLM

NameScore
D-alanylalanine synthetase0.294
D-alanine--D-alanine ligase0.254
D-Ala-D-Ala ligase0.232
6.3.2.40.215
D-alanine--D-alanine ligase B0.000
D-alanine--D-alanine ligase A0.000
Designed by MP, using an AMD MI250 GPU