M5RVD

Prompt

6.1.1.6

Ligases. Forming carbon-oxygen bonds. Ligases.forming aminoacyl-tRNA and related compounds. lysine--tRNA ligase.

AI Generated Sequence

285 AAs
MSDELLARAWTPEFARELLKRYPDGKPGGEPVTFETGIGPSGLPHIGTFGEVVRTTMVREALRELGLPTRLIAFSDDMDGLRKVPDNVPNPGLLAEHLGKPLTRIPDPYGTYESFAGHNNAALRDALDELGFDYEFISSTELYRSGRFADALLRVLRAYDAIMAVMLPTLGEERQATYAPFLPISEPTGRVYQVPVKAVDAATGAVRYECEDGELYQGTVTGGHAKQLAWKVDFAMRWVALDVEYMAYGKDLIDSVKLDSKIIRALGDRPPEGFVNYELVGNAGK

Ligand/Cofactor

ATP

C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N

Validation Metrics

PLDDT87.7
NLMSIM90.0
AACOMP93.5
Seqdif (SeqID)31.5 (WP_275500794.1)
Structdif (F-Target)12.1 (1irx B)

ProtNLM

NameScore
Lysine--tRNA ligase0.528
6.1.1.60.376
Lysyl-tRNA synthetase0.058
LysRS0.021
Lysyl-tRNA synthetase, class II0.002
Lysine-tRNA ligase0.002
Designed by MP, using an AMD MI250 GPU